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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018181.1_1697_1788_F

Intron Information:

Intron Rank:

140708

Intron Class:

major

Intron Phase:

Intron Coordinates:

1697 - 1788

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGCCAC

5'SS Class:

major

3'SS Sequence:

TTTTTTCACCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAC

U12 Branch Point Sequence:

TTTTTTTTCACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.7

0.61

61.1

39.6

Major BPS

90.1

0.99

0.7

91.6

20.3

Major PPT

83.9

0.76

0.8

77.9

35.5

Minor 5ss

32.9

-2

38.7

40.9

Minor BPS

69.1

0.58

1.7

81.25

33.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025750

Chromosome:

PEDO01018181.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034345

1373 - 2504

1132