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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018212.1_852_1067_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

852 - 1067

Intron Length:

216

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGAGG

5'SS Class:

strong_major

3'SS Sequence:

ATCTTCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GATTTAT

U12 Branch Point Sequence:

GTTGATTTATCT

Flanking Amino Acid:

GPKPKTFLLKAQAKAKAKTY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

73.4

43.3

Major BPS

70.9

0.52

1.2

63.7

43.9

Major PPT

86.1

0.81

0.7

80.9

30.4

Minor 5ss

31.7

-2.1

3.1

39.7

45.9

Minor BPS

0.14

1.9

73.39

43.5

Associated Gene:

Gene:

CBX8

Ensembl Gene ID:

ENSAPLG00000016656

Chromosome:

PEDO01018212.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045466

21 - 2294

2274