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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018220.1_101710_102105_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

101710 - 102105

Intron Length:

396

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGTGCT

5'SS Class:

strong_major

3'SS Sequence:

CCCGTCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGTAAC

U12 Branch Point Sequence:

GTCGTGGTAACG

Flanking Amino Acid:

SSSRQHWRAEAQRHVNDLYE

Intron Amino Acid Position:

130

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.9

78.9

33.5

Major BPS

59.3

0.23

1.3

61.4

43.2

Major PPT

72.4

0.5

0.8

65.1

30.7

Minor 5ss

33.9

-1.8

3.5

49.9

46.5

Minor BPS

39.6

-0.9

2.5

46.56

46.6

Associated Gene:

Gene:

PLEC

Ensembl Gene ID:

ENSAPLG00000026039

Chromosome:

PEDO01018220.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047965

79769 - 102492

22724

ENSAPLT00000046504

79769 - 105485

25717

ENSAPLT00000022767

79769 - 102492

22724