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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018220.1_13523_13573_R


Intron Information:

Intron Rank:
3

Intron Class:
major-like

Intron Phase:
1

Intron Coordinates:
13523 - 13573

Intron Length:
51

Sequence Information:

Terminal Dinucleotides:
GC-AG

5'SS Sequence:
CAG|GCAGGAAAT

5'SS Class:
strong_major

3'SS Sequence:
GACACCGTGCCAG|T

3'SS Class:
degenerate_major

U2 Branch Point Sequence:
ATTTCAG

U12 Branch Point Sequence:
TTTCAGTGAAGA

Flanking Amino Acid:
TTLIKKKESTVAGQKDAVSS

Intron Amino Acid Position:
2961

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
87.3
0.88
0.9
76.4
38.9

Major BPS
67.2
0.43
1.5
77.4
37.3

Major PPT
52.2
0.05
1.1
42.5
42.8

Minor 5ss
23.4
-3.1
4
39
46.4

Minor BPS
43.2
-0.5
2.4
62.87
42.9

Associated Gene:

Gene:
EPPK1

Ensembl Gene ID:

Chromosome:
PEDO01018220.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

9320 - 35058
25739