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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018220.1_99765_99876_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

99765 - 99876

Intron Length:

112

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGGG

5'SS Class:

strong_major

3'SS Sequence:

TCGCTGTCGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCGCAC

U12 Branch Point Sequence:

CCCCCTGCAACT

Flanking Amino Acid:

IALNYLKHRQVKLVNIRNDD

Intron Amino Acid Position:

186

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

63.9

42.4

Major BPS

49.1

-0

1.3

60.7

37.6

Major PPT

65.4

0.35

1.1

61.2

40.1

Minor 5ss

23.2

-3.1

3.2

28.7

43.7

Minor BPS

43.3

-0.4

2.1

56.65

46.2

Associated Gene:

Gene:

PLEC

Ensembl Gene ID:

ENSAPLG00000026039

Chromosome:

PEDO01018220.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038922

79769 - 105485

25717

ENSAPLT00000022767

79769 - 102492

22724

ENSAPLT00000047965

79769 - 102492

22724

ENSAPLT00000046504

79769 - 105485

25717