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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018233.1_3730_4616_R


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
3730 - 4616

Intron Length:
887

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GGG|GTAAGGACT

5'SS Class:
strong_major

3'SS Sequence:
CTTGCTCTTGCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTCTGAA

U12 Branch Point Sequence:
CCCTTCTGAATT

Flanking Amino Acid:
PLLTVDGPRGDIDDPLLEMK

Intron Amino Acid Position:
368

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
82.1
0.76
1
76.1
39.5

Major BPS
82.1
0.8
0.8
71.6
36.4

Major PPT
82.9
0.74
0.8
76.8
31.8

Minor 5ss
34.5
-1.8
3.2
41.9
44.5

Minor BPS
58.3
0.34
1.5
67.49
44.2

Associated Gene:

Gene:
KANSL3

Ensembl Gene ID:

Chromosome:
PEDO01018233.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

1435 - 8996
7562