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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018233.1_7566_7872_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
7566 - 7872

Intron Length:
307

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GGG|GTAAGATCT

5'SS Class:
strong_major

3'SS Sequence:
TCCTGGTTCTCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTTTAAT

U12 Branch Point Sequence:
TCTCCTTTAATT

Flanking Amino Acid:
DRLARLANEGACNEPVLRRI

Intron Amino Acid Position:
140

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
82.7
0.77
1
75.1
35.8

Major BPS
87.2
0.92
0.9
87.6
25.6

Major PPT
74.9
0.56
0.9
71.8
38.1

Minor 5ss
40.1
-1.1
3.1
49.7
46.1

Minor BPS
76.8
0.92
1.1
84.98
35.9

Associated Gene:

Gene:
KANSL3

Ensembl Gene ID:

Chromosome:
PEDO01018233.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

1435 - 8996
7562