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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018267.1_2074_3798_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2074 - 3798

Intron Length:

1725

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTGTGTTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTTCAG

U12 Branch Point Sequence:

GTGCGCTTCAGG

Flanking Amino Acid:

GPSARGISVEVEYCPCVIAN

Intron Amino Acid Position:

111

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.9

1.03

0.7

89.8

22.3

Major BPS

48.3

-0.1

1.7

59.3

47.1

Major PPT

76.3

0.59

1.1

72.9

42.2

Minor 5ss

35.1

-1.7

3.1

48.5

47.2

Minor BPS

40.6

-0.8

2.3

45.01

46.9

Associated Gene:

Gene:

MED20

Ensembl Gene ID:

ENSAPLG00000020671

Chromosome:

PEDO01018267.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038211

1073 - 4022

2950