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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018272.1_500_2517_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

500 - 2517

Intron Length:

2018

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTCAA

5'SS Class:

strong_major

3'SS Sequence:

ATGCAGCCGGCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTTGCAG

U12 Branch Point Sequence:

TTGTCTTGCAGC

Flanking Amino Acid:

TQTFRHAKTTASAFPPDDEP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

70.2

37.7

Major BPS

45.5

-0.2

1.7

60.7

45.9

Major PPT

54.4

0.1

1.1

47.6

40.7

Minor 5ss

26.7

-2.7

2.9

31.1

Minor BPS

46.7

-0.2

2.1

62.46

43.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021128

Chromosome:

PEDO01018272.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041815

39 - 2563

2525