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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018280.1_707_967_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

707 - 967

Intron Length:

261

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGGAAA

5'SS Class:

major

3'SS Sequence:

TCTTCTGCTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTGCAG

U12 Branch Point Sequence:

GTGCCTGCAGCC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

1.1

34.7

Major BPS

40.6

-0.5

1.6

48.7

45.1

Major PPT

81.3

0.7

0.8

73.1

37.3

Minor 5ss

27.9

-2.5

2.8

31.2

42.5

Minor BPS

39.3

-0.8

2.2

48.69

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000031176

Chromosome:

PEDO01018280.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045297

22 - 3779

3758