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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018327.1_15164_16586_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

15164 - 16586

Intron Length:

1423

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGA|GTAAGTGTA

5'SS Class:

major

3'SS Sequence:

TACACCACAGAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TTGTCTTACACC

Flanking Amino Acid:

GDTVVRPVLHEKFSLLINLI

Intron Amino Acid Position:

445

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

75.2

35.1

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

49.1

-0

1.1

47.5

33.8

Minor 5ss

37.5

-1.4

3.3

45.6

43.6

Minor BPS

52.6

0.06

2.1

69.38

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002543

Chromosome:

PEDO01018327.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029484

1206 - 23878

22673