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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018327.1_16742_17259_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16742 - 17259

Intron Length:

518

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATA|GTAAGTTGT

5'SS Class:

major

3'SS Sequence:

TATTTATTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

AATAATTTAATA

Flanking Amino Acid:

SRNHNAEGYIPQDPAVFGAD

Intron Amino Acid Position:

394

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

74.3

Major BPS

90.7

1.01

0.7

19.9

Major PPT

0.85

0.8

85.7

33.4

Minor 5ss

43.8

-0.7

2.9

59.9

39.9

Minor BPS

57.9

0.24

1.5

64.87

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002543

Chromosome:

PEDO01018327.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029484

1206 - 23878

22673

ENSAPLT00000009774

584 - 24792

24209

ENSAPLT00000002625

3 - 23878

23876