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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018327.1_20229_21288_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20229 - 21288

Intron Length:

1060

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTAAGTAAT

5'SS Class:

major

3'SS Sequence:

CTTATCTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

TGCATCTTATCT

Flanking Amino Acid:

ETVPYDGIWIDMNEISNFVQ

Intron Amino Acid Position:

230

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.68

81.8

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

0.83

0.7

84.5

30.2

Minor 5ss

-1.1

2.9

57.3

41.2

Minor BPS

58.3

0.34

1.7

72.94

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002543

Chromosome:

PEDO01018327.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029484

1206 - 23878

22673

ENSAPLT00000009774

584 - 24792

24209

ENSAPLT00000002625

3 - 23878

23876