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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018327.1_2150_2263_R


Intron Information:

Intron Rank:
22

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
2150 - 2263

Intron Length:
114

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CTG|GTCAGTTTG

5'SS Class:
major

3'SS Sequence:
CATTTCATTTTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ATTTCAT

U12 Branch Point Sequence:
TTACATTTCATT

Flanking Amino Acid:
AEGMRFIIILDPTISGNETD

Intron Amino Acid Position:
994

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
74
0.56
1.3
71.5
41.1

Major BPS
91.2
1.02
0.7
91.7
20.2

Major PPT
77.3
0.61
0.8
74.8
34.4

Minor 5ss
39.4
-1.2
2.8
47
42.6

Minor BPS
49
0
1.9
71.08
40.1

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
PEDO01018327.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

584 - 24792
24209

3 - 23878
23876

1206 - 23878
22673