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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018327.1_6116_7736_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6116 - 7736

Intron Length:

1621

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TAA|GCAAAAATG

5'SS Class:

major

3'SS Sequence:

CCATCAAACCCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

TCACCATCAAAC

Flanking Amino Acid:

CEQLGCVWEVNSPSCYYNSD

Intron Amino Acid Position:

667

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.1

0.43

1.2

41.5

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

57.7

0.17

38.3

Minor 5ss

27.8

-2.5

40.2

39.9

Minor BPS

46.3

-0.3

1.9

56.17

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002543

Chromosome:

PEDO01018327.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002625

3 - 23878

23876