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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018327.1_6135_7740_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6135 - 7740

Intron Length:

1606

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCAAA

5'SS Class:

strong_major

3'SS Sequence:

TTGTCATTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

CACTCACTAACC

Flanking Amino Acid:

KCEQLGCVWEQSPSNPDSPS

Intron Amino Acid Position:

688

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.1

0.97

0.8

83.2

30.8

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

83.2

0.75

0.9

77.6

35.6

Minor 5ss

38.7

-1.3

2.8

48.1

47.6

Minor BPS

49.6

-0

61.57

43.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002543

Chromosome:

PEDO01018327.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029484

1206 - 23878

22673

ENSAPLT00000009774

584 - 24792

24209