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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018357.1_687_797_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

687 - 797

Intron Length:

111

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTACG

5'SS Class:

strong_major

3'SS Sequence:

CTGTCCCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTCAC

U12 Branch Point Sequence:

CCGGTGTCACCC

Flanking Amino Acid:

ACIVAMFLPGRSLVLLGALT

Intron Amino Acid Position:

340

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

71.4

40.3

Major BPS

57.2

0.18

1.4

63.1

44.5

Major PPT

79.7

0.67

0.8

73.3

31.6

Minor 5ss

29.2

-2.4

2.8

33.6

41.8

Minor BPS

34.7

-1.1

2.2

36.55

41.6

Associated Gene:

Gene:

SLC52A3

Ensembl Gene ID:

ENSAPLG00000020612

Chromosome:

PEDO01018357.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017432

541 - 1864

1324