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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018408.1_1007_1242_F

Intron Information:

Intron Rank:

125031

Intron Class:

major

Intron Phase:

Intron Coordinates:

1007 - 1242

Intron Length:

236

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCAAG

5'SS Class:

strong_major

3'SS Sequence:

CCTCCCTCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCAGCAA

U12 Branch Point Sequence:

CCCTCAGCAACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.9

77.9

38.6

Major BPS

46.6

-0.2

1.4

53.9

41.5

Major PPT

74.5

0.55

0.7

68.5

Minor 5ss

38.7

-1.3

2.8

47.8

47.9

Minor BPS

41.8

-0.6

2.3

51.1

45.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017336

Chromosome:

PEDO01018408.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031345

21 - 1933

1913