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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018417.1_11811_12358_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

11811 - 12358

Intron Length:

548

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGGG

5'SS Class:

strong_major

3'SS Sequence:

TCCCTTCAACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTTAT

U12 Branch Point Sequence:

ATCCCTTCAACC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

63.9

42.4

Major BPS

79.1

0.72

69.3

38.4

Major PPT

68.7

0.42

0.9

62.7

37.5

Minor 5ss

23.2

-3.1

3.2

28.7

43.7

Minor BPS

59.2

0.27

1.5

66.51

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000031103

Chromosome:

PEDO01018417.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041758

6638 - 13215

6578

ENSAPLT00000038927

6638 - 13215

6578