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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018434.1_1115_1806_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1115 - 1806

Intron Length:

692

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

ACG|GCTCGGCCC

5'SS Class:

weak_major

3'SS Sequence:

ACAGCACCACGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTGTAAC

U12 Branch Point Sequence:

GGTGTTGTAACA

Flanking Amino Acid:

VPRLLRHVINARC*

Intron Amino Acid Position:

160

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.4

0.18

1.4

41.7

Major BPS

74.5

0.61

1.1

75.6

36.6

Major PPT

42.3

-0.4

1.6

35.3

Minor 5ss

17.5

-3.8

3.7

27.3

Minor BPS

47.6

-0.1

2.1

59.73

40.6

Associated Gene:

Gene:

SC5D

Ensembl Gene ID:

ENSAPLG00000013738

Chromosome:

PEDO01018434.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014305

92 - 1817

1726