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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018434.1_284_632_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

284 - 632

Intron Length:

349

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGCTGC

5'SS Class:

major

3'SS Sequence:

CCAGGCTGGTCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CACTGAC

U12 Branch Point Sequence:

TGCCACTGACGT

Flanking Amino Acid:

LYDNIEDSPYGVFLSMLSFL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.7

0.58

60.5

41.4

Major BPS

61.3

0.28

52.7

34.2

Major PPT

0.05

1.1

49.5

43.7

Minor 5ss

39.2

-1.2

50.7

Minor BPS

40.8

-0.6

56.08

45.5

Associated Gene:

Gene:

SC5D

Ensembl Gene ID:

ENSAPLG00000013738

Chromosome:

PEDO01018434.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047342

92 - 1308

1217

ENSAPLT00000014305

92 - 1817

1726