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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018507.1_533_829_R


Intron Information:

Intron Rank:
136397

Intron Class:
major-like

Intron Phase:

Intron Coordinates:
533 - 829

Intron Length:
297

Sequence Information:

Terminal Dinucleotides:
GT-GG

5'SS Sequence:
AGG|GTCTTCATT

5'SS Class:
weak_major

3'SS Sequence:
TCTTCCTCTTTGG|G

3'SS Class:
degenerate_major

U2 Branch Point Sequence:
CCTTCAT

U12 Branch Point Sequence:
GGGCCTTCATCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
50.2
0.01
1.4
58.1
46.2

Major BPS
75
0.62
1.1
77.2
36

Major PPT
45.1
-0.2
3.2
73.9
31.2

Minor 5ss
46.4
-0.4
2.7
58.5
45.8

Minor BPS
46.2
-0.2
1.8
59.39
43.6

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
PEDO01018507.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

21 - 2243
2223