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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018509.1_35921_36273_F


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
35921 - 36273

Intron Length:
353

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTCAGCGCG

5'SS Class:
major

3'SS Sequence:
TCCTCTCCCGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GCCTGAG

U12 Branch Point Sequence:
TCCGCCTGAGCT

Flanking Amino Acid:
RELPACRRNGGFPPSGSDSP

Intron Amino Acid Position:
393

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
72.4
0.53
1.3
60.6
44.5

Major BPS
44.9
-0.3
1.6
39
42.9

Major PPT
77.8
0.63
0.7
72.7
25.4

Minor 5ss
32.1
-2
3.2
39.4
46

Minor BPS
50.5
0.09
1.9
68.42
48.1

Associated Gene:

Gene:
RASSF7

Ensembl Gene ID:

Chromosome:
PEDO01018509.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

33154 - 37040
3887

33154 - 39950
6797