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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018512.1_2308_2381_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2308 - 2381

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCCTC

5'SS Class:

strong_major

3'SS Sequence:

TCTGCATCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTGCAT

U12 Branch Point Sequence:

CTGGCCTCACCG

Flanking Amino Acid:

FGEISLINIRGNRSGNRRTA

Intron Amino Acid Position:

430

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.7

0.82

0.9

72.2

39.5

Major BPS

62.4

0.31

1.4

73.6

41.8

Major PPT

71.5

0.49

0.9

62.2

38.8

Minor 5ss

-1.5

3.2

50.1

46.5

Minor BPS

46.1

-0.4

50.86

49.1

Associated Gene:

Gene:

CNGA4

Ensembl Gene ID:

ENSAPLG00000025958

Chromosome:

PEDO01018512.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047846

21 - 4247

4227