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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018512.1_620_719_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

620 - 719

Intron Length:

100

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGCCGGGC

5'SS Class:

major

3'SS Sequence:

CCGGTGCCGCCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CGGTGAC

U12 Branch Point Sequence:

AGCCCGGTGACG

Flanking Amino Acid:

VMYNWIVIVCRSCFAELQEQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.4

0.25

1.2

50.6

40.5

Major BPS

47.5

-0.1

1.3

38.2

41.7

Major PPT

55.3

0.12

1.1

46.2

41.5

Minor 5ss

28.6

-2.5

3.7

41.2

45.5

Minor BPS

38.7

-1

2.5

42.82

42.5

Associated Gene:

Gene:

CNGA4

Ensembl Gene ID:

ENSAPLG00000025958

Chromosome:

PEDO01018512.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047846

21 - 4247

4227