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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018513.1_1151_1235_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1151 - 1235

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

CCTCTCCACCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTCCAC

U12 Branch Point Sequence:

TTTGGGGTAAAA

Flanking Amino Acid:

LSGSYVAPKSVWLPAMKAKG

Intron Amino Acid Position:

516

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

69.1

43.2

Major BPS

58.6

0.21

1.2

70.2

35.9

Major PPT

0.45

0.9

61.7

33.9

Minor 5ss

32.9

-2

42.1

44.4

Minor BPS

38.6

-0.8

2.8

59.76

46.2

Associated Gene:

Gene:

AP1B1

Ensembl Gene ID:

ENSAPLG00000028207

Chromosome:

PEDO01018513.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043853

373 - 3644

3272

ENSAPLT00000041619

373 - 3644

3272

ENSAPLT00000021674

373 - 3644

3272