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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018516.1_743_879_R


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
743 - 879

Intron Length:
137

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ATG|GTATGCAGA

5'SS Class:
major

3'SS Sequence:
CTCTGCCCCGCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GGGTCAC

U12 Branch Point Sequence:
GTCACCGGCACG

Flanking Amino Acid:
AAGAVYALYYDAIQFYSNGT

Intron Amino Acid Position:
80

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
73.6
0.56
1
63.3
42.6

Major BPS
46.8
-0.2
1.4
48.8
46.3

Major PPT
72
0.49
0.8
65.4
30.5

Minor 5ss
45
-0.5
2.6
54.4
44.8

Minor BPS
38.9
-1
2.4
45.55
46.4

Associated Gene:

Gene:
AQP10

Ensembl Gene ID:

Chromosome:
PEDO01018516.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

28 - 1254
1227