Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018520.1_1615_1866_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1615 - 1866

Intron Length:

252

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGGGCGTC

5'SS Class:

major

3'SS Sequence:

CCTCCATCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTCCAT

U12 Branch Point Sequence:

TCGCCCTCCATC

Flanking Amino Acid:

TRQMWNRTFYGVTGFLKIDE

Intron Amino Acid Position:

137

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.7

0.39

1.1

57.9

41.8

Major BPS

52.4

0.06

1.3

41.7

Major PPT

70.8

0.47

0.8

61.5

33.8

Minor 5ss

34.5

-1.8

3.7

49.5

47.1

Minor BPS

46.6

-0.2

55.63

43.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018212

Chromosome:

PEDO01018520.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029696

21 - 5636

5616