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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018520.1_2182_2261_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2182 - 2261

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGCGGC

5'SS Class:

major

3'SS Sequence:

TCTCGCCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

ACCCCCTCACCG

Flanking Amino Acid:

FDNNDPQCHKASLSTLEVLS

Intron Amino Acid Position:

213

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

1.1

57.5

42.3

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

72.4

0.5

0.8

65.6

30.3

Minor 5ss

30.8

-2.2

3.3

32.5

42.6

Minor BPS

45.7

-0.4

1.9

47.25

45.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018212

Chromosome:

PEDO01018520.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029696

21 - 5636

5616