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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018558.1_1386_1636_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1386 - 1636

Intron Length:

251

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCCAGAAGG

5'SS Class:

strong_major

3'SS Sequence:

CCCAGCTCGGGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GCTGCAA

U12 Branch Point Sequence:

TGGTGCCGACCC

Flanking Amino Acid:

RNATLWVAASGTGTRGLWGA

Intron Amino Acid Position:

323

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.79

67.9

42.7

Major BPS

44.3

-0.3

1.5

51.3

44.2

Major PPT

44.9

-0.2

1.7

45.5

36.4

Minor 5ss

-3.7

3.3

23.2

36.7

Minor BPS

40.1

-0.7

2.2

52.65

44.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018625

Chromosome:

PEDO01018558.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024159

71 - 1829

1759