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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018572.1_491_681_R


Intron Information:

Intron Rank:
1

Intron Class:
major-like

Intron Phase:
1

Intron Coordinates:
491 - 681

Intron Length:
191

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CCG|GTAGGACCG

5'SS Class:
major

3'SS Sequence:
GCGCCCACGCCAG|G

3'SS Class:
degenerate_major

U2 Branch Point Sequence:
CTTGCAC

U12 Branch Point Sequence:
TTTTGCCCACCT

Flanking Amino Acid:
GHRAVAIDLPGYGDSPPTGT

Intron Amino Acid Position:
145

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
68.8
0.44
1.1
51.2
45.6

Major BPS
52.8
0.07
1.4
66.7
39.9

Major PPT
52.9
0.07
1
43.6
37.5

Minor 5ss
31.4
-2.1
3.3
40.8
45

Minor BPS
46
-0.2
2.4
76.94
45.3

Associated Gene:

Gene:
ABHD14A

Ensembl Gene ID:

Chromosome:
PEDO01018572.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

200 - 2109
1910