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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018603.1_224_985_F

Intron Information:

Intron Rank:
126826
Intron Class:
major
Intron Phase:
Intron Coordinates:
224 - 985
Intron Length:
762

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AAG|GTCAACACC
5'SS Class:
major
3'SS Sequence:
TTGTGTTGCCTAG|C
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TACACAT
U12 Branch Point Sequence:
TGGTGTTACACA
Flanking Amino Acid:
Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
65.5
0.37
1.3
63.1
41.8
Major BPS
69.9
0.49
1
75.2
29.8
Major PPT
68.1
0.41
1
61.7
44.5
Minor 5ss
35.4
-1.7
2.8
44.7
42.9
Minor BPS
42.2
-0.6
2.3
54.95
44.5

Associated Gene:

Gene:
Ensembl Gene ID:
ENSAPLG00000018326
Chromosome:
PEDO01018603.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000028506
21 - 2164
2144