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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018622.1_2846_3189_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2846 - 3189

Intron Length:

344

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGT|GTGTGGTGC

5'SS Class:

weak_major

3'SS Sequence:

TACCTGGGTGAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGATCAA

U12 Branch Point Sequence:

ACATGATCAAGT

Flanking Amino Acid:

PRAAPAAYVRARLRSGV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

54.7

0.11

1.1

46.5

38.5

Major BPS

63.9

0.34

1.2

40.9

Major PPT

52.1

0.05

1.2

51.7

41.6

Minor 5ss

39.7

-1.2

3.2

49.6

47.1

Minor BPS

40.7

-0.6

2.3

56.58

45.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020300

Chromosome:

PEDO01018622.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034785

2403 - 3211

809