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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018640.1_11765_11891_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11765 - 11891

Intron Length:

127

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGGAGC

5'SS Class:

strong_major

3'SS Sequence:

TGGCTTTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

CTGTTCTCATCT

Flanking Amino Acid:

SEFRNITVREEEKLELQKLL

Intron Amino Acid Position:

981

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

69.5

41.1

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

78.8

0.65

0.9

73.2

37.2

Minor 5ss

38.7

-1.3

3.1

51.6

45.2

Minor BPS

52.6

0.16

1.9

71.34

45.8

Associated Gene:

Gene:

SNRNP200

Ensembl Gene ID:

ENSAPLG00000004313

Chromosome:

PEDO01018640.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004616

21 - 20092

20072

ENSAPLT00000031008

639 - 20092

19454