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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018640.1_11973_12288_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11973 - 12288

Intron Length:

316

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCCCT

5'SS Class:

strong_major

3'SS Sequence:

TCTCCTTCCCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTGAT

U12 Branch Point Sequence:

CCTCTCTGATCT

Flanking Amino Acid:

KESIEEPSAKINVLLQAFIS

Intron Amino Acid Position:

1008

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

71.4

40.3

Major BPS

0.72

38.9

Major PPT

80.1

0.68

0.7

72.7

32.1

Minor 5ss

35.1

-1.7

3.1

48.4

47.3

Minor BPS

48.8

-0

1.8

65.56

Associated Gene:

Gene:

SNRNP200

Ensembl Gene ID:

ENSAPLG00000004313

Chromosome:

PEDO01018640.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031008

639 - 20092

19454

ENSAPLT00000004616

21 - 20092

20072