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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018640.1_1228_1335_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1228 - 1335

Intron Length:

108

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGCG

5'SS Class:

strong_major

3'SS Sequence:

GCTCGTTCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCCAAC

U12 Branch Point Sequence:

CTCCCCACATCC

Flanking Amino Acid:

SFIQAALGDQPRDILCGAAD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

66.5

39.1

Major BPS

53.1

0.08

1.2

62.4

32.3

Major PPT

71.4

0.48

0.9

64.8

36.4

Minor 5ss

24.1

-3

3.2

29.4

43.5

Minor BPS

42.9

-0.5

53.03

44.2

Associated Gene:

Gene:

SNRNP200

Ensembl Gene ID:

ENSAPLG00000004313

Chromosome:

PEDO01018640.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031008

639 - 20092

19454

ENSAPLT00000004616

21 - 20092

20072