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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018640.1_12373_12819_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12373 - 12819

Intron Length:

447

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

TCTGCTCCCACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCCCAG

U12 Branch Point Sequence:

TCTGCTCCCACA

Flanking Amino Acid:

LMADMVYVTQSAGRLMRAIF

Intron Amino Acid Position:

1036

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.96

0.8

77.5

32.9

Major BPS

45.8

-0.2

1.6

58.2

40.4

Major PPT

75.2

0.57

0.8

68.7

31.8

Minor 5ss

26.6

-2.7

30.5

43.3

Minor BPS

41.5

-0.6

2.2

55.53

43.9

Associated Gene:

Gene:

SNRNP200

Ensembl Gene ID:

ENSAPLG00000004313

Chromosome:

PEDO01018640.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031008

639 - 20092

19454

ENSAPLT00000004616

21 - 20092

20072