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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018640.1_123922_124033_R


Intron Information:

Intron Rank:
11

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
123922 - 124033

Intron Length:
112

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTACCCCCA

5'SS Class:
major

3'SS Sequence:
TCTTCCACCACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CATTTAC

U12 Branch Point Sequence:
TTTTCTTCCACC

Flanking Amino Acid:
FPCKQTSLDEGILLKWTKGF

Intron Amino Acid Position:
502

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
64.3
0.34
1.3
53.6
45.3

Major BPS
66.4
0.41
1
59
37.6

Major PPT
75.9
0.58
0.8
69.7
29.6

Minor 5ss
42.6
-0.8
3.1
57.9
46.3

Minor BPS
61.4
0.34
2
78.34
37.6

Associated Gene:

Gene:
HK2

Ensembl Gene ID:

Chromosome:
PEDO01018640.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

119387 - 128664
9278

119387 - 129114
9728