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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018640.1_125983_126027_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

125983 - 126027

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CCG|GCCACTTTG

5'SS Class:

weak_major

3'SS Sequence:

GAGAAGTAAGTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTTTGAG

U12 Branch Point Sequence:

CTATCGAGAAGT

Flanking Amino Acid:

GKLTSDLRTTGSGWFFAHEI

Intron Amino Acid Position:

297

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.1

0.22

1.4

56.6

47.8

Major BPS

60.1

0.25

1.6

60.7

45.9

Major PPT

46.4

-0.2

1.1

33.6

40.2

Minor 5ss

34.9

-1.7

3.9

50.4

45.9

Minor BPS

40.9

-0.6

2.5

62.53

46.9

Associated Gene:

Gene:

HK2

Ensembl Gene ID:

ENSAPLG00000011882

Chromosome:

PEDO01018640.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032578

120194 - 134020

13827