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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018640.1_12927_13146_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12927 - 13146

Intron Length:

220

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTCAG

5'SS Class:

strong_major

3'SS Sequence:

GGTGTCCTCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTCAC

U12 Branch Point Sequence:

CCCGTCTCACCC

Flanking Amino Acid:

LNLCKMIDKRMWQSMCPLRQ

Intron Amino Acid Position:

1071

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

70.9

40.9

Major BPS

67.3

0.43

1.2

71.3

36.7

Major PPT

69.5

0.44

39.9

Minor 5ss

-1.6

45.9

42.4

Minor BPS

42.6

-0.5

1.8

44.77

44.2

Associated Gene:

Gene:

SNRNP200

Ensembl Gene ID:

ENSAPLG00000004313

Chromosome:

PEDO01018640.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004616

21 - 20092

20072

ENSAPLT00000031008

639 - 20092

19454