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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018640.1_13266_13539_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

13266 - 13539

Intron Length:

274

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTACTGAGG

5'SS Class:

weak_major

3'SS Sequence:

CTTTCTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTGAC

U12 Branch Point Sequence:

TCTGTCCTGACA

Flanking Amino Acid:

RLYDLNHNEIGELIRMPKMG

Intron Amino Acid Position:

1111

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.3

0.22

1.2

48.6

47.1

Major BPS

68.9

0.47

59.2

39.1

Major PPT

89.5

0.89

0.6

84.5

23.2

Minor 5ss

31.1

-2.2

3.3

39.8

45.9

Minor BPS

52.4

0.07

1.8

66.29

40.5

Associated Gene:

Gene:

SNRNP200

Ensembl Gene ID:

ENSAPLG00000004313

Chromosome:

PEDO01018640.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004616

21 - 20092

20072

ENSAPLT00000031008

639 - 20092

19454