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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018640.1_13695_13852_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13695 - 13852

Intron Length:

158

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCTGT

5'SS Class:

strong_major

3'SS Sequence:

TGCTCTTGCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGGTAAC

U12 Branch Point Sequence:

TGGACCCTGACA

Flanking Amino Acid:

IAPDFQWDEKVHGSSEAFWI

Intron Amino Acid Position:

1163

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.84

0.9

74.8

38.1

Major BPS

50.5

0.01

1.3

53.1

40.5

Major PPT

73.5

0.53

0.9

72.3

37.7

Minor 5ss

40.1

-1.1

3.1

55.9

48.3

Minor BPS

0.12

1.8

65.14

40.8

Associated Gene:

Gene:

SNRNP200

Ensembl Gene ID:

ENSAPLG00000004313

Chromosome:

PEDO01018640.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031008

639 - 20092

19454

ENSAPLT00000004616

21 - 20092

20072