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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018640.1_14412_15011_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14412 - 15011

Intron Length:

600

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGGGTACC

5'SS Class:

major

3'SS Sequence:

TGTCTGCCCCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACGTTAA

U12 Branch Point Sequence:

TCTGTCTTGTCT

Flanking Amino Acid:

FPFFNPIQTQVFNTVYNSDD

Intron Amino Acid Position:

1284

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.8

0.54

1.1

65.8

40.2

Major BPS

50.8

0.02

1.2

43.4

39.2

Major PPT

71.5

0.49

0.9

62.1

39.9

Minor 5ss

29.7

-2.3

2.8

28.9

35.8

Minor BPS

44.3

-0.3

3.5

73.86

43.8

Associated Gene:

Gene:

SNRNP200

Ensembl Gene ID:

ENSAPLG00000004313

Chromosome:

PEDO01018640.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004616

21 - 20092

20072

ENSAPLT00000031008

639 - 20092

19454