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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018640.1_16194_16288_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16194 - 16288

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGCTT

5'SS Class:

strong_major

3'SS Sequence:

CTCTCCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCGCAT

U12 Branch Point Sequence:

CTCTCCGCATGG

Flanking Amino Acid:

RPVPLELHIQGFNISHTQTR

Intron Amino Acid Position:

1478

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

73.4

43.3

Major BPS

57.4

0.18

1.4

67.6

40.6

Major PPT

79.6

0.67

0.7

73.3

24.9

Minor 5ss

35.3

-1.7

3.8

55.3

48.9

Minor BPS

36.9

-1.1

2.4

42.57

48.5

Associated Gene:

Gene:

SNRNP200

Ensembl Gene ID:

ENSAPLG00000004313

Chromosome:

PEDO01018640.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031008

639 - 20092

19454

ENSAPLT00000004616

21 - 20092

20072