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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018640.1_16803_17050_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

16803 - 17050

Intron Length:

248

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGCGGC

5'SS Class:

major

3'SS Sequence:

CCGTGCCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTGAG

U12 Branch Point Sequence:

GTGGGCTGACTG

Flanking Amino Acid:

RRVVEQLFSSGAVQVMVASR

Intron Amino Acid Position:

1588

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.4

0.6

59.3

40.2

Major BPS

-0.1

1.6

46.5

Major PPT

72.7

0.51

0.9

65.1

36.3

Minor 5ss

31.4

-2.1

3.3

37.8

42.4

Minor BPS

-0.9

2.1

40.18

44.2

Associated Gene:

Gene:

SNRNP200

Ensembl Gene ID:

ENSAPLG00000004313

Chromosome:

PEDO01018640.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004616

21 - 20092

20072

ENSAPLT00000031008

639 - 20092

19454