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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018640.1_17160_17297_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17160 - 17297

Intron Length:

138

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGC|GTGAGTGTG

5'SS Class:

major

3'SS Sequence:

CTGTGTGCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCATGAA

U12 Branch Point Sequence:

GCTTCATGAAAG

Flanking Amino Acid:

DTQYYNGKIHAYVDYPIYDV

Intron Amino Acid Position:

1624

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.3

0.36

1.3

63.1

43.4

Major BPS

62.9

0.32

1.1

53.9

41.5

Major PPT

66.8

0.38

57.5

43.2

Minor 5ss

31.8

-2.1

3.2

35.6

41.4

Minor BPS

48.5

-0.2

1.9

56.04

44.3

Associated Gene:

Gene:

SNRNP200

Ensembl Gene ID:

ENSAPLG00000004313

Chromosome:

PEDO01018640.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031008

639 - 20092

19454

ENSAPLT00000004616

21 - 20092

20072