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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018640.1_17407_17579_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17407 - 17579

Intron Length:

173

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTGAG

5'SS Class:

strong_major

3'SS Sequence:

TGCCCTGCTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

GTTTATTTATCC

Flanking Amino Acid:

CVIMCQGSKKDFFKKFLYEP

Intron Amino Acid Position:

1661

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

68.4

38.7

Major BPS

88.7

0.96

0.8

36.5

Major PPT

68.6

0.42

0.9

65.6

36.1

Minor 5ss

25.2

-2.9

3.2

43.6

Minor BPS

59.4

0.27

1.8

72.09

38.9

Associated Gene:

Gene:

SNRNP200

Ensembl Gene ID:

ENSAPLG00000004313

Chromosome:

PEDO01018640.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031008

639 - 20092

19454

ENSAPLT00000004616

21 - 20092

20072