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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018640.1_17770_17921_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17770 - 17921

Intron Length:

152

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGCAGA

5'SS Class:

major

3'SS Sequence:

GCTGTACCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAG

U12 Branch Point Sequence:

AATTCCTGAGCC

Flanking Amino Acid:

TQNPNYYNLQGVSHRHLSDH

Intron Amino Acid Position:

1724

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.6

0.6

42.7

Major BPS

54.8

0.12

1.6

53.3

44.2

Major PPT

70.9

0.47

0.9

62.8

38.7

Minor 5ss

32.9

-2

2.8

31.3

42.6

Minor BPS

61.5

0.34

1.7

71.65

38.8

Associated Gene:

Gene:

SNRNP200

Ensembl Gene ID:

ENSAPLG00000004313

Chromosome:

PEDO01018640.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004616

21 - 20092

20072

ENSAPLT00000031008

639 - 20092

19454