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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018640.1_178_1055_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

178 - 1055

Intron Length:

878

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTGGG

5'SS Class:

major

3'SS Sequence:

TCCCCCCTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTGAC

U12 Branch Point Sequence:

GGGGCCTGACCC

Flanking Amino Acid:

KPQMQEERRAKRRKRDEDRH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

40.1

Major BPS

51.1

0.03

1.2

39.9

Major PPT

69.1

0.43

0.9

64.8

30.7

Minor 5ss

28.4

-2.5

3.1

31.4

36.6

Minor BPS

46.3

-0.3

1.9

52.7

44.3

Associated Gene:

Gene:

SNRNP200

Ensembl Gene ID:

ENSAPLG00000004313

Chromosome:

PEDO01018640.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004616

21 - 20092

20072