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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01018640.1_1838_2408_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1838 - 2408

Intron Length:

571

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCGAT

5'SS Class:

strong_major

3'SS Sequence:

CCTCTTCCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTTAC

U12 Branch Point Sequence:

CTTACGGGAACT

Flanking Amino Acid:

VNVQFESDEEEGDEDIYGEV

Intron Amino Acid Position:

160

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

77.5

32.9

Major BPS

66.4

0.41

1.1

57.4

41.4

Major PPT

0.54

0.8

69.4

29.9

Minor 5ss

32.6

-2

3.4

45.9

49.3

Minor BPS

43.2

-0.4

2.6

69.31

47.1

Associated Gene:

Gene:

SNRNP200

Ensembl Gene ID:

ENSAPLG00000004313

Chromosome:

PEDO01018640.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031008

639 - 20092

19454

ENSAPLT00000004616

21 - 20092

20072